Biology 438 Spring 2012
MWF 10-11 AM Lecture Science 134
R 11:00-2:00 PM Laboratory Science 315
R 2:00-5:00 PM Laboratory Science 315
Hotlines: 860-465-4444 or 800-578-1449
Dr. Ross Koning
MWF 9-10 AM Science 356
F 11-1 Science 356
Cell: 860-933-2712
koning∂easternct⋅edu
| Date | Lecture Topic | Thursday Laboratory | Resources |
| Wed-Jan 18 | Introduction: Science |
No Quiz This Week Statistics | S12 Leaf Data |
| Fri-Jan 20 |
Why Study Plants? | ||
| Mon-Jan 23 | Basic Statistics |
Due: Statistics Worksheet Quiz 1 Morphology Tissue Culture | |
| Wed-Jan 25 | Basic Botany | ||
| Fri-Jan 27 | Basic Botany (continued) | ||
| Mon-Jan 30 | More Basic Botany |
Due: Plant Morphology Amp. Abs. Quiz 2 Plant Anatomy |
Leaf Cross Section Stem Cross Section Root Cross Section |
| Wed-Feb 1 | Finish Basic Botany | ||
| Fri-Feb 3 | Basic Plant Cytology 1 | ||
| Mon-Feb 6 | Basic Plant Cytology 2 |
Due: Plant Anatomy Amp. Abs. Quiz 3 Cytology | Sample Abstract |
| Wed-Feb 8 | Basic Plant Cytology 2 | ||
| Fri-Feb 10 |
Cytoskeleton Cell Cycle | ||
| Mon-Feb 13 | Enzyme Basics |
Due: Plant Cytology Amp. Abs. Quiz 4 Enzyme Kinetics | |
| Wed-Feb 15 | Enzyme Kinetics | ||
| Fri-Feb 17 | President's Vacation | ||
| Mon-Feb 20 | President's Vacation |
Quiz 5 (Finish Lecture Material) Excel: NonLinear Regression | Nonlinear Regression Pointers |
| Wed-Feb 22 | Mineral Requirements | ||
| Fri-Feb 24 |
Finish Minerals Water and Water Movement | ||
| Mon-Feb 27 |
Finish Water Movement Osmosis |
Quiz 6 Mineral Nutrition Diffusion |
Periodic Chart Betacyanin Structure |
| Wed-Feb 29 | Sadie Hawkins Day Root intake | ||
| Fri-Mar 2 | Transpiration | ||
| Mon-Mar 5 | Solutes |
Due: Diffusion Amp. Abs. Quiz 7 Osmosis | |
| Wed-Mar 7 | Finish Solutes | ||
| Fri-Mar 9 |
Due: Osmosis Translocation | ||
| Mon-Mar 12 | Light and Chlorophyll |
Due: Enzyme lab report Due: Osmosis Amp. Abs. Quiz 8 Replenish Mineral Elements Transpiration | |
| Wed-Mar 14 |
Light Reactions | ||
| Fri-Mar 16 | Finish: Light Reactions | ||
| Mon-Mar 19 | Spring Break | ||
| Wed-Mar 21 | |||
| Fri-Mar 23 | |||
| Date | Lecture Topic | Thursday Laboratory | Resources |
| Mon-Mar 26 | Intro: Calvin Cycle |
Due: Transpiration Amp. Abs. Quiz 9 Planting Seeds, etc. Finish Mineral Nutrition Model System: Happy Bird | |
| Wed-Mar 28 | Finish: Calvin Cycle | ||
| Fri-Mar 30 | Photorespiration | ||
| Mon-Apr 2 |
C4 and CAM Cycles |
Due: Happy Bird Handout Only Due: Mineral Nutrition Amp. Abs. Quiz 10 General Introduction Photon Flux Density CO2 Electrode Alternative Treat: Pea Stem Growth |
PSN Calculations More Cuvette Data |
| Wed-Apr 4 |
Finish: C4 and CAM Cycles Plant Respiration | ||
| Fri-Apr 6 | Day of Reflection | ||
| Mon-Apr 9 |
Continue: Plant Respiration |
Due: Photosynthesis Amp. Abs. Quiz 11 Treat Root Initiation Treat Bean Branch Initiation Plant Beans for Leaf Abscission | |
| Wed-Apr 11 |
Finish Respiration Pentose Phosphate Shunt | ||
| Fri-Apr 13 | Phytochrome | ||
| Mon-Apr 16 |
Finish Phytochrome |
Quiz 12 Plant Spelt "Wheat Berries" Seed Finish: Pea Stem Growth Finish: Root Initiation Finish: Bean Branch Initiation Measure: Light and Stem Growth |
Horm/Gen Stem Growth Plot Root Initiation Plot Root Internode Plot Bean Branch: Auxin Bean Branch: Cytokinin |
| Wed-Apr 18 | Photoperiodism | ||
| Fri-Apr 20 |
Blue-Light Responses | ||
| Mon-Apr 23 |
Set up Seed Germination Finish: Blue-Light Responses |
Due: Pea Stem Growth Amp. Abs. Due: Root Initiation Amp. Abs. Due: Bean Branch Amp. Abs. Quiz 13 Plant Tissue Culture Outcome Treat: Leaf Abscission Treat: Leaf Senescence Measure: Seed Germination |
Tissue Culture Plot |
| Wed-Apr 25 | Auxins | ||
| Fri-Apr 27 |
More About Auxin,
Gibberellins | ||
| Mon-Apr 30 |
Share data for Leaf Senescence Cytokinins |
Due: Tissue Culture Amp. Abs. Due: Leaf Senescence Amp. Abs. Due: Light and Growth Amp. Abs. Quiz 14 Finish: Seed Germination Finish: Leaf Abscission |
Senescence Plots Seed Germination Z-test Sheet Abscission Plots |
| Wed-May 2 |
Ethylene,
Abscisic Acid | ||
| Mon-May 7 | Due: Seed Germination Worksheet Only Due: Leaf Abscission Amp. Abs. 9-11 AM Comprehensive Final Exam in Plant Physiology in Science 315 | ||
OBJECTIVES:
This course satisfies one of the six upper-level course requirements for the biology major.
It is designed to provide you with comprehensive exposure to the subject of plant
physiology. You will learn about the structure and function of plants throughout
their development from seeds through reproduction. Considerable experience in
chemistry is assumed, as is recall from BIO 220 (Cell Biology).
Our discussions and exercises will cover from the biochemical level through
the organismal level. The laboratory exercises will complement the lectures.
If you are a person who has over-specialized in molecular biology, zoology or
human biology, this course will expand your horizons significantly. As a study
of producers, this course will examine those organisms so important because of
their position at the energy and elemental intake portion of the energy pyramid
and the food web! Upon these organisms depends human survival.
ELECTRONIC MATERIALS:
You will find lecture notes, lab exercises, due dates,
and other course materials available for you on the World Wide Web at this address: http://plantphys.info/ There may be a required
username:___________________ and password:___________________ to access some of
these materials as they are copyrighted and therefore cannot be given out over
the internet beyond the members of our class.
TEXT:
Several texts in Plant Physiology are published...I have chosen none of them
because they are too deep (expecting too much background undergrads do not have
yet) or are extremely expensive or both. If you want a finished, published text,
older editions (except the first edition) are probably just fine for this course,
but here are references for latest edition choices:
L. Taiz and E. Zeiger. 2007. Plant Physiology. 4th ed. Sinauer Associates, Inc. This is the deep, standard text at $90.
W. G. Hopkins and N. P. A. Huner. 2009. Introduction to Plant Physiology. 4th ed. John Wiley & Sons, Inc. While more introductory, it costs $110.
B. B. Buchanan, W. Gruissem, and R. L. Jones. 2000. Biochemistry and Molecular Biology of Plants. John Wiley & Sons, Inc. This book is VERY deep in biochemistry and extremely expensive at $130 for a new paperback copy of an aging edition! However, it is very comprehensive!
LAB MANUAL:
Separate exercise worksheets will be handed out for your use. You should obtain a
three-ring binder to hold them together as a laboratory manual. The exercises will
overlap in time and due-dates, so having them all together and with you in class
each day is critical! The binder will help with that. I know spiral books are all
the rage, but a 3-ring binder is vastly superior for this course! Put your
name inside your binder so when it is lost you have at least some hope of recovery!
LAB KIT:
Large three-ring binder with zipper pouch containing: Small Scissors, Metric Rule,
Fine Forceps, Pencil (mechanical preferred), Eraser, Simple Calculator (+−×÷=).
Former students suggest getting some color pencils for your zipper pouch. A small pocket
knife or whatever you like to clean under your fingernails would be good to have
too. You absolutely need to have a USB=flash=jump drive. All of these are available
inexpensively at retail stores just about anywhere. The alternative to the USB drive
is to bring your own laptop with Microsoft Excel installed to some lab sessions (not
inexpensive but maybe most useful to you)!
Lab worksheets even partially completed in ink will receive a 10% penalty...use
pencil only...keep it in your zipper pouch so it is ready for use!
GRADING:
Your final course grade will be based on weekly quizzes, laboratory worksheets and amplified abstracts, a lab report, and a final exam as described below.
QUIZZES:
There will be a quiz given each week for the first few minutes of laboratory time.
Emphasis for each quiz will be whatever has been covered since the previous quiz
in either lecture or laboratory, but questions could be on anything previously in
the course and/or synthesis of separate ideas presented in the course.
Each quiz may consist of a variety of question types; be prepared for all!
You will be given one week after each quiz is returned in which to challenge,
in writing, the grading/scoring of that quiz. THERE WILL BE NO MAKE-UP QUIZZES!
Being tardy for the quiz will shorten your time to work on the quiz...when
all students who are on-time to class are finished, all quizzes will be collected
promptly. You be prompt too! Quizzes are collectively worth 35% of the course grade.
LAB EXERCISES:
Each laboratory exercise will be inspired by a handout. You will work with one or more
partner(s). Each person will fill out and hand in their own handout and/or write a
one-page abstract about the project amplified
by attached notes, drawings, graphs, calculations, etc., depending on the exercise.
Electronic files are not acceptable documentation of your laboratory exercises.
The worksheet and/or amplified abstract will be due one week after the exercise
is officially completed and the due date will be posted on the official syllabus
page for this course on the website. The papers are due at the beginning of the
class period on the indicated date. Papers received after the starting time of the class
by even 1 minute will be considered one-day late. Late papers will receive a penalty of
10% per day late but after the first graded exercise paper is returned to one
of your classmates, your late submission is no longer acceptable and earns a grade of 0%!
I grade as promptly as possible, so you need to be prompt too! The laboratory exercises
are collectively worth 35% of the course grade.
LABORATORY REPORT:
The format of the lab report must follow the standard guidelines in the departmental
style manual (Pechenik). The laboratory report must be handed in as a hard-copy;
electronic files are not acceptable. The laboratory report is due no later
than 2 PM on Thursday, March 15, 2010; failure to hand in this report by this deadline
will result in a course grade of F, regardless of
the other grades earned in the course. The laboratory report is worth 10% of the
course grade. You should not let this assignment go to the end of the semester
without any attention on your part! This needs to be an upper-level report showing
your experience in our core writing courses.
COMPREHENSIVE FINAL EXAM:
You will take a comprehensive final exam in this course at the appropriate time on the official final exam schedule. The exam covers all material in this course. Studying the quizzes will assist you in preparing for the final. But you will also want to be prepared to answer broader questions, perhaps even integrative essay questions that go beyond weekly coverage. The Final Exam constitutes 20% of the course grade.
PARTICIPATION:
Participation in this laboratory course is essential but, due to its subjective nature, is not given grading credit in a specific numerical sense. However, should your course grade come near a grading border, my sense of your participation in this course will be used as leverage into or barrier from the next-higher grade. Being on-time to all classes, having all materials needed for class, turning in assignments on time or early, being thorough in your laboratory work, being attentive in both lab and lecture classes, working efficiently and cooperatively with lab partners, asking pertinent questions, having answers to my questions in lectures, etc. are all good ways to impress me about your commitment to learning about plant physiology. If you are a person who procrastinates, who does only the minimum, who is tardy with everything, who complains about academic workloads, who watches lab partners doing the work, who sleeps in class, or who can not or will not do simple math, well...you will get what you earn...and only what you earn.
If you are a commuter to our campus, you should remember that parking is often hard to find and leave extra time for the search, and for the walking that may be required once you are parked. Also, you need to think about alternatives should you have vehicle problems. Is there a family member who can give you a ride? Do you have contacts for other ECSU students from your town with whom you might carpool? Are your tires good enough for the driving conditions that New England weather will present? Commuters need to be courageous about driving in snow, on glare ice, in torrential rain, etc.
ACCOMMODATIONS:
If you believe you will need special accommodations for this class, please contact the Office of AccessAbility Services at (860) 465-5573 as soon as possible. I cannot provide accommodations until I have received a formal accommodation letter from the Office of AccessAbility Services.
CHEATING:
In many exercises you will work with laboratory partners and will share
the data obtained. Your calculations, your reports, abstracts, and quizzes
must, however, be done ON YOUR OWN. Plagiarism will not be tolerated and
severe penalties will be invoked. Copying will not be tolerated. Extra credit
work will not be given to any one for any reason!